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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904978.1_cds_XP_016455126.1_49086
CDS Infomation

[gene=LOC107779244] [db_xref=GeneID:107779244] [protein=laccase-4-like] [protein_id=XP_016455126.1] [location=join(121784..121879,122016..122167,122301..122545,122689..122817,123061..123978,124237..124367)] [gbkey=CDS]
Sequence

ATGGCATCTTTGGTTCAAGCTGTTGTTCTGGTGGCTCTTGCAACTTCATTTTTTCCTGCA
TTTGTGGAGTCGATTGTTCGTCATTACAAGTTCACTGTGGTGAGGAAAAATGCAACAAGA
TTGTGTGCAACTAAGCCTATTATCACTGTAAATGGAAAATTTCCAGGGCCAACTCTCTAT
GCTAGAGAAGATGATACAGTGCTTGTAAGGGTTGTCAACCATGTCCAAGACAATGTTACC
ATCCATTGGCATGGAGTCAGACAACTTCGGACAGGATGGTCGGACGGACCAGCATATATT
ACTCAATGCCCAATACAGACAGGGCAAAGCTATCTCTACAACTTCACCCTCACTGGGCAA
AGAGGTACCCTTCTTTGGCATGCACATATCAACTGGCAAAGGGCAACGGTACATGGTGCC
ATCGTCATCTTGCCCAAACGGCGCGTTCCTTATCCATTCCCCAAGCCAGAAAAGGAAGAA
ATTATAATATTAGGAGAATGGTGGAGTTCAGATGTTGAGGCAGTAATCAACCAAGCAATG
AAAATGGGAGTGGCTCCCAATGTATCAGATGCACACACCATCAATGGCCATCCTGGACCT
GCACCAAATTGTTCTTCAAAGGGTTACACCCTACATGTGGAGAGTGGCAAGACCTACTTG
CTCCGTATCATTAATGCAGCATTGAACGAAGAGCTCTTTTTCAAGATTGCAGGGCACAAT
TTGACTGTTGTTGAGGTCGATGCATCTTACGTTAAACCCTTCAAGACGGACACCATTTTC
ATCGCTCCAGGACAGACAACAAACGCCATTCTCACTGCTGATCAGAGTGCTGGAAAGTAC
TTAATAGCCGTTTCTCCTTTTATGGACACCATAGTTGCCACTGATAATCTAACTGCAACC
GGAACAGTCCACTATCTAGGAACTGATGCACTTTCCCCTACTGCTCTCACTACCATTCCC
TCTCGAAATGCTACCCCAGTAACCAACATTTTTGTAGACTCCCTACGGAGCCTAAACTCG
AAAAAATACCCTGCTAATGTTCCATTGACAATTGATCATTCGTTGCTTCTAACTATGGGT
ATTGGTGTTAATCCTTGCGCTACTTGCCAAAATGGAAGCAGAGTTGTGGCAGCTATCAAT
AATGTTACCTTTGTCATGCCTACTACTGCTATCCTCCAAGCACATTATTATAATATAAGT
GGTGTCTACACCGCGGATTTCCCTGGAAATCCATCAATACCTTTCAACTATACTGGCACT
CCACCAACAAATTTGCAGACACAAAATGGTACAAAAGTTTACAAAGTTGAATTTAATTCA
ACTGTCCAGGTAGTGCTCCAAGGAACTTCTATCATAGCACCAGAGAGCCATCCAACACAT
CTACACGGATTTAATTTCTTTGTAGTTGGGAAAGGAGTTGGAAATTATGATCCTAAAAAT
GATCCAAAGAAGTTCAACCTTGTGGATCCAGTTGAGAGGAATACTATGAGTGTACCAACT
GCTGGATGGACTGCCATTAGATTCCGAGCAGATAATCCTGGTGTTTGGTTTATGCACTGT
CATTTGGAGGTTCATACAACATGGGGACTTAAGATGGGATTCCTGGTGGAAAATGGAAAA
GGCCCTAATCAATCAATCCTACCTCCTCCAAGTGATCTTCCAAAATGCTAA

Peptide Sequence

PEP ID

XP_016455126.1
PEP Infomation

PREDICTED: laccase-4-like [Nicotiana tabacum]
Sequence

MASLVQAVVLVALATSFFPAFVESIVRHYKFTVVRKNATRLCATKPIITVNGKFPGPTLY
AREDDTVLVRVVNHVQDNVTIHWHGVRQLRTGWSDGPAYITQCPIQTGQSYLYNFTLTGQ
RGTLLWHAHINWQRATVHGAIVILPKRRVPYPFPKPEKEEIIILGEWWSSDVEAVINQAM
KMGVAPNVSDAHTINGHPGPAPNCSSKGYTLHVESGKTYLLRIINAALNEELFFKIAGHN
LTVVEVDASYVKPFKTDTIFIAPGQTTNAILTADQSAGKYLIAVSPFMDTIVATDNLTAT
GTVHYLGTDALSPTALTTIPSRNATPVTNIFVDSLRSLNSKKYPANVPLTIDHSLLLTMG
IGVNPCATCQNGSRVVAAINNVTFVMPTTAILQAHYYNISGVYTADFPGNPSIPFNYTGT
PPTNLQTQNGTKVYKVEFNSTVQVVLQGTSIIAPESHPTHLHGFNFFVVGKGVGNYDPKN
DPKKFNLVDPVERNTMSVPTAGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMGFLVENGK
GPNQSILPPPSDLPKC

Transcript Sequence

Gene sequence data has not been registered.